STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU28027.1PFAM: Spore germination protein; KEGG: pjd:Pjdr2_5515 spore germination protein. (371 aa)    
Predicted Functional Partners:
ADU28026.1
KEGG: adg:Adeg_0298 germination protein, Ger(X)C family.
 
  
 0.924
ADU28028.1
PFAM: GerA spore germination protein; KEGG: csc:Csac_2777 GerA spore germination protein.
 
  
 0.862
ADU28266.1
PFAM: Protein of unknown function, membrane YfhO; KEGG: clo:HMPREF0868_1443 hypothetical protein.
  
     0.727
ADU26264.1
KEGG: aoe:Clos_1406 hypothetical protein.
  
     0.602
ADU28176.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: cbb:CLD_1298 AP endonuclease.
  
     0.584
ADU26852.1
TIGRFAM: germination protein YpeB; KEGG: csc:Csac_2335 hypothetical protein.
 
     0.582
ADU28078.1
KEGG: pjd:Pjdr2_2740 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
 
  
 0.566
ADU26754.1
PFAM: Sporulation stage III protein AE; KEGG: cce:Ccel_1912 stage III sporulation protein AE.
  
     0.560
ADU28206.1
PFAM: RNA binding S1 domain protein; KEGG: chl:Chy400_3085 RNA binding S1 domain protein.
  
     0.528
ADU25930.1
KEGG: cth:Cthe_2090 hypothetical protein.
  
     0.514
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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