STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tktATransketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (663 aa)    
Predicted Functional Partners:
talB
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.996
rpe
D-ribulose-5-phosphate 3-epimerase; COG0036; similar to AA sequence EcoGene EG11960; similar to AA sequence GI 77958286; Belongs to the ribulose-phosphate 3-epimerase family.
 0.992
pgi
Glucose-6-phosphate isomerase; COG0166; similar to AA sequence EcoGene EG10702; similar to AA sequence GI 123444047; Belongs to the GPI family.
  
 0.980
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 0.978
eno
Enolase; COG0148; similar to AA sequence EcoGene EG10258; similar to AA sequence GI 183600071.
   
 0.971
pykF
Pyruvate kinase I; Corrected polynucleotide track (1); COG0469; similar to AA sequence EcoGene EG10804; similar to AA sequence GI 77975293; Belongs to the pyruvate kinase family.
  
 0.971
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 0.969
fbaA
Fructose-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.966
kdsD
D-arabinose 5-phosphate isomerase; COG0794; similar to AA sequence EcoGene EG12803; similar to AA sequence GI 22124068.
  
 
 0.963
nagE
PTS system N-acetylglucosamine-specific IIBC subunit; N terminal extension; COG1263; similar to AA sequence EcoGene EG10635; similar to AA sequence GI 123443193.
   
 
 0.963
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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