STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motBFlagellar motor component; COG1360; similar to AA sequence EcoGene EG10602; similar to AA sequence GI 158327337. (326 aa)    
Predicted Functional Partners:
motA
Flagellar motor component; COG1291; similar to AA sequence EcoGene EG10601; similar to AA sequence GI 209906133.
 
 0.999
REG_1840
Putative transcriptional regulator; COG0784; similar to AA sequence GI 70731828.
 
  
 0.992
fliA
Flagellar biosynthesis sigma factor; COG1191; similar to AA sequence EcoGene EG11355; similar to AA sequence GI 45442811; Belongs to the sigma-70 factor family.
 
  
 0.986
fliS
Flagellin-specific chaperone; COG1516; similar to AA sequence EcoGene EG11388; similar to AA sequence GI 157147085.
 
  
 0.977
fliL
Putative flagellar biogenesis protein associated with the basal body; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.965
flgK
Flagellar hook-filament junction protein 1; COG1256; similar to AA sequence EcoGene EG11967; similar to AA sequence GI 157147096.
 
  
 0.948
fliD
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.948
fliF
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.926
flgI
Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.910
flhA
Flagellar biosynthesis component; N terminal truncation; COG1298; similar to AA sequence EcoGene EG14273; similar to AA sequence GI 145597797.
 
  
 0.898
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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