STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yceBPutative lipoprotein; Similar to AA sequence EcoGene EG11117; similar to AA sequence GI 77959368. (208 aa)    
Predicted Functional Partners:
REG_1478
Hypothetical protein; COG1376; similar to AA sequence GI 77959201.
  
     0.761
REG_1217
Hypothetical protein; Similar to AA sequence EcoGene EG14399; similar to AA sequence GI 108808240.
  
     0.758
ycbG
Hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.741
tus
Ter-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.
  
     0.735
REG_1105
Hypothetical protein; Similar to AA sequence EcoGene EG11123; similar to AA sequence GI 77960761.
  
     0.723
mlaB
Cytoplasmic protein with a STAS domain; COG3113; similar to AA sequence EcoGene EG12797; similar to AA sequence GI 77973401.
  
     0.722
REG_1547
Putative lipoprotein; COG3107; similar to AA sequence GI 77963507.
  
     0.719
yafD
Endonuclease/Exonuclease/phosphatase domain-containing hypothetical protein; COG3021; similar to AA sequence EcoGene EG11650; similar to AA sequence GI 123441268.
  
     0.712
hha
Hemolysin expression-modulating protein; Similar to AA sequence EcoGene EG10439; similar to AA sequence GI 22124953.
  
     0.708
REG_1406
Hypothetical protein; COG2165; similar to AA sequence EcoGene EG12081; similar to AA sequence GI 123443516.
  
     0.705
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.