STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argSarginyl-tRNA synthetase; COG0018; similar to AA sequence EcoGene EG10071; similar to AA sequence GI 77979757. (576 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  
 0.992
metG
Methionyl-tRNA synthetase; C terminal truncation; COG0143; similar to AA sequence EcoGene EG10586; similar to AA sequence GI 77975898.
 
 0.975
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
  
 0.971
proS
Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]
  
 0.969
leuS
leucyl-tRNA synthetase; COG0495; similar to AA sequence EcoGene EG10532; similar to AA sequence GI 162421444; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.946
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
  
 0.908
lysS
Lysyl-tRNA synthetase (class II); COG1190; similar to AA sequence EcoGene EG10552; similar to AA sequence GI 123443572.
  
 0.905
pheT
Phenylalanine tRNA synthetase beta subunit; COG0072; similar to AA sequence EcoGene EG10710; similar to AA sequence GI 77975256; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.887
asnS
Asparaginyl tRNA synthetase; Corrected polynucleotide tracks (2), low coverage; COG0017; similar to AA sequence EcoGene EG10094; similar to AA sequence GI 50121465.
   
 0.884
glnS
Glutamine tRNA synthetase; N terminal extension; COG0008; similar to AA sequence EcoGene EG10390; similar to AA sequence GI 45435774.
  
 0.874
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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