STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REG_0670GerE domain-containing putative transcriptional regulator; COG2771; similar to AA sequence GI 123441927. (218 aa)    
Predicted Functional Partners:
arcB
Hybrid sensory histidine kinase in two-component regulatory system with ArcA; COG0784; similar to AA sequence EcoGene EG10062; similar to AA sequence GI 77977063.
  
 0.995
REG_1838
Putative diguanylate cyclase; COG2202; similar to AA sequence EcoGene EG12396; similar to AA sequence GI 157370660.
  
 0.995
REG_1900
Putative two-component sensor/regulator; Two contigs; COG0642; similar to AA sequence GI 108810018.
   
 0.911
REG_1840
Putative transcriptional regulator; COG0784; similar to AA sequence GI 70731828.
   
 0.834
priC
Primosomal replication protein N'; COG3923; similar to AA sequence EcoGene EG10765; similar to AA sequence GI 123443304.
  
     0.724
REG_0060
lysR domain-containing putative transcriptional regulator; COG0583; similar to AA sequence GI 22126040; Belongs to the LysR transcriptional regulatory family.
  
    0.711
REG_0383
PAS and GerE domain-containing putative transcriptional regulator; COG2197; similar to AA sequence GI 123442304.
  
 0.634
REG_0384
PAS and GerE domain-containing putative transcriptional regulator; Similar to AA sequence GI 27479693.
  
 0.634
REG_0408
PAS and GerE domain-containing putative transcriptional regulator; COG2197; similar to AA sequence GI 85060113.
  
 0.634
REG_0472
PAS and GerE domain-containing putative transcriptional regulator; COG2202; similar to AA sequence GI 85060113.
  
 0.634
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.