node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arcB | dnaA | REG_1544 | REG_1372 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA; COG0784; similar to AA sequence EcoGene EG10062; similar to AA sequence GI 77977063. | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | 0.487 |
arcB | dnaN | REG_1544 | REG_1371 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA; COG0784; similar to AA sequence EcoGene EG10062; similar to AA sequence GI 77977063. | DNA polymerase III beta subunit; COG0592; similar to AA sequence EcoGene EG10242; similar to AA sequence GI 226326919. | 0.706 |
arcB | hda | REG_1544 | REG_0932 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA; COG0784; similar to AA sequence EcoGene EG10062; similar to AA sequence GI 77977063. | ATPase involved in DNA replication initiation; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily. | 0.487 |
arcB | polA | REG_1544 | REG_0860 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA; COG0784; similar to AA sequence EcoGene EG10062; similar to AA sequence GI 77977063. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.771 |
arcB | topA | REG_1544 | REG_0870 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA; COG0784; similar to AA sequence EcoGene EG10062; similar to AA sequence GI 77977063. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.524 |
diaA | dnaA | REG_1546 | REG_1372 | DnaA initiator-associating factor for replication initiation; Two contigs; COG0279; similar to AA sequence EcoGene EG12780; similar to AA sequence GI 50119280. | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | 0.731 |
diaA | hda | REG_1546 | REG_0932 | DnaA initiator-associating factor for replication initiation; Two contigs; COG0279; similar to AA sequence EcoGene EG12780; similar to AA sequence GI 50119280. | ATPase involved in DNA replication initiation; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily. | 0.490 |
dnaA | arcB | REG_1372 | REG_1544 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | Hybrid sensory histidine kinase in two-component regulatory system with ArcA; COG0784; similar to AA sequence EcoGene EG10062; similar to AA sequence GI 77977063. | 0.487 |
dnaA | diaA | REG_1372 | REG_1546 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | DnaA initiator-associating factor for replication initiation; Two contigs; COG0279; similar to AA sequence EcoGene EG12780; similar to AA sequence GI 50119280. | 0.731 |
dnaA | dnaB | REG_1372 | REG_0832 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.953 |
dnaA | dnaN | REG_1372 | REG_1371 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | DNA polymerase III beta subunit; COG0592; similar to AA sequence EcoGene EG10242; similar to AA sequence GI 226326919. | 0.993 |
dnaA | hda | REG_1372 | REG_0932 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | ATPase involved in DNA replication initiation; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily. | 0.712 |
dnaA | lpcA | REG_1372 | REG_0843 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | 0.646 |
dnaA | polA | REG_1372 | REG_0860 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.490 |
dnaA | thrA | REG_1372 | REG_1148 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | Fused aspartokinase I and homoserine dehydrogenase I; COG0527; similar to AA sequence EcoGene EG10998; similar to AA sequence GI 123440965. | 0.516 |
dnaA | topA | REG_1372 | REG_0870 | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.454 |
dnaB | dnaA | REG_0832 | REG_1372 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Chromosomal replication initiator protein and DNA-binding transcriptional dual regulator; COG0593; similar to AA sequence EcoGene EG10235; similar to AA sequence GI 77973772. | 0.953 |
dnaB | dnaN | REG_0832 | REG_1371 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | DNA polymerase III beta subunit; COG0592; similar to AA sequence EcoGene EG10242; similar to AA sequence GI 226326919. | 0.521 |
dnaB | hda | REG_0832 | REG_0932 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | ATPase involved in DNA replication initiation; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily. | 0.756 |
dnaB | polA | REG_0832 | REG_0860 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.705 |