STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REG_1069Putative haloacid dehalogenase-like hydrolase; COG1011; similar to AA sequence GI 170726345. (249 aa)    
Predicted Functional Partners:
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.969
REG_1070
Phosphoribulokinase/uridine kinase; COG0572; similar to AA sequence GI 170726346.
 
 
  0.946
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.945
REG_1074
Hypothetical protein; Similar to AA sequence GI 170726347.
    
  0.725
REG_1733
Putative class II Aldolase/Adducin; COG3347; similar to AA sequence GI 13473109.
 
     0.684
REG_1075
Glycosyltransferase II; C terminal truncation; similar to AA sequence GI 123966636.
 
     0.659
nadE
Putative NAD synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.655
glpF
Glycerol uptake facilitator; Major intrinsic protein family; COG0580; similar to AA sequence EcoGene EG10396; similar to AA sequence GI 77961043; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.641
REG_0973
Alpha/beta hydrolase domain-containing hypothetical protein; COG0596; similar to AA sequence EcoGene EG11776; similar to AA sequence GI 77976363.
  
 
 0.639
REG_1154
Putative hydrolases of the HAD superfamily; COG0561; similar to AA sequence EcoGene EG11470; similar to AA sequence GI 77973645.
    
 0.596
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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