STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REG_2000Hypothetical protein; COG1664; similar to AA sequence GI 22127994. (179 aa)    
Predicted Functional Partners:
fliS
Flagellin-specific chaperone; COG1516; similar to AA sequence EcoGene EG11388; similar to AA sequence GI 157147085.
    
   0.529
ssaQ
Type III secretion system protein; COG1886; similar to AA sequence GI 77956158.
    
   0.529
REG_2001
Polar amino acid ABC transporter periplasmic amino acid-binding subunit; COG0834; similar to AA sequence GI 22127993; Belongs to the bacterial solute-binding protein 3 family.
       0.482
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.