Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
REG_2001Polar amino acid ABC transporter periplasmic amino acid-binding subunit; COG0834; similar to AA sequence GI 22127993; Belongs to the bacterial solute-binding protein 3 family. (275 aa)    
Predicted Functional Partners:
REG_1838
Putative diguanylate cyclase; COG2202; similar to AA sequence EcoGene EG12396; similar to AA sequence GI 157370660.
   
 0.956
arcB
Hybrid sensory histidine kinase in two-component regulatory system with ArcA; COG0784; similar to AA sequence EcoGene EG10062; similar to AA sequence GI 77977063.
    
 0.936
REG_1435
Putative amino acid transport system permease; COG0765; similar to AA sequence GI 77973788.
 0.883
glnP
Permease component of ABC-type amino acid transport system; COG0765; similar to AA sequence EcoGene EG10388; similar to AA sequence GI 123443061.
 0.874
REG_1436
Putative polar amino acid ABC transporter permease; COG0765; similar to AA sequence GI 77958174.
 0.865
gltL
ATPase component of glutamate ABC transporter; COG1126; similar to AA sequence EcoGene EG12663; similar to AA sequence GI 209907127.
 
 0.843
artM
Membrane component of arginine ABC transporter; Corrected polynucleotide track (1), low coverage; COG4160; similar to AA sequence EcoGene EG11627; similar to AA sequence GI 77963052.
 
 
 0.787
glnQ
ATPase component of ABC-type polar amino acid transport system; COG1126; similar to AA sequence EcoGene EG10389; similar to AA sequence GI 77961175.
 
 0.780
REG_1840
Putative transcriptional regulator; COG0784; similar to AA sequence GI 70731828.
    
 0.753
REG_1900
Putative two-component sensor/regulator; Two contigs; COG0642; similar to AA sequence GI 108810018.
    
 0.646
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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