STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REG_2008Hypothetical protein; Similar to AA sequence GI 37527963. (143 aa)    
Predicted Functional Partners:
REG_0973
Alpha/beta hydrolase domain-containing hypothetical protein; COG0596; similar to AA sequence EcoGene EG11776; similar to AA sequence GI 77976363.
    
  0.886
fkpA
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase); COG0545; similar to AA sequence EcoGene EG12900; similar to AA sequence GI 77975000.
    
  0.777
REG_1337
Leucine-rich repeat-containing protein.
   
 0.684
hepA
RNA Polymerase (RNAP)-binding ATPase and RNAP recycling factor; COG0553; similar to AA sequence EcoGene EG11083; similar to AA sequence GI 123440999.
    
   0.601
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
   0.549
REG_0548
Glycosyltransferase group 1; COG0438; similar to AA sequence GI 116754379.
  
 
  0.545
dnaK
Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
   0.543
rplC
50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
    
  0.535
eno
Enolase; COG0148; similar to AA sequence EcoGene EG10258; similar to AA sequence GI 183600071.
    
   0.523
adk
Adenylate kinase; COG0563; similar to AA sequence EcoGene EG10032; similar to AA sequence GI 77979352.
    
   0.497
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.