STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARB_04242Peroxisomal membrane protein PEX16. (391 aa)    
Predicted Functional Partners:
ARB_02888
Peroxisomal membrane protein receptor Pex19, putative.
    
 0.944
ARB_07108
Uncharacterized protein.
    
 0.848
ARB_02966
Uncharacterized protein.
   
 
 0.827
ARB_03268
RING-type domain-containing protein.
     
 0.824
ARB_06561
SH3 domain-containing protein.
     
 0.822
ARB_04794
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
     
 0.775
ARB_03306
Uncharacterized protein.
   
 
 0.739
ARB_06583
Uncharacterized protein.
     
 0.675
ARB_06148
ABC transporter domain-containing protein.
     
 0.672
ARB_03588
Uncharacterized protein.
     
 0.672
Your Current Organism:
Trichophyton benhamiae
NCBI taxonomy Id: 663331
Other names: Arthroderma benhamiae CBS 112371, T. benhamiae CBS 112371, Trichophyton benhamiae CBS 112371
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.