Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARB_00169 | ARB_00438 | D4AVF6 | D4AW73 | Uncharacterized protein. | Uncharacterized protein. | 0.673 |
ARB_00169 | ARB_01608 | D4AVF6 | D4AZJ0 | Uncharacterized protein. | RAD52 DNA repair protein RADC. | 0.894 |
ARB_00169 | ARB_01727 | D4AVF6 | D4AZV7 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.999 |
ARB_00169 | ARB_02542 | D4AVF6 | D4B259 | Uncharacterized protein. | Exonuclease, putative. | 0.852 |
ARB_00169 | ARB_02596 | D4AVF6 | D4B2I8 | Uncharacterized protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.832 |
ARB_00169 | ARB_03186 | D4AVF6 | D4B3Z7 | Uncharacterized protein. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.860 |
ARB_00169 | ARB_03387 | D4AVF6 | D4B4J7 | Uncharacterized protein. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.961 |
ARB_00169 | ARB_04243 | D4AVF6 | D4AIZ5 | Uncharacterized protein. | SAE2 domain-containing protein. | 0.907 |
ARB_00169 | ARB_04991 | D4AVF6 | D4AKZ5 | Uncharacterized protein. | RecQ family helicase MusN. | 0.905 |
ARB_00169 | ARB_06028 | D4AVF6 | D4AP61 | Uncharacterized protein. | Inositol kinase kinase (UvsB), putative. | 0.916 |
ARB_00438 | ARB_00169 | D4AW73 | D4AVF6 | Uncharacterized protein. | Uncharacterized protein. | 0.673 |
ARB_00438 | ARB_01608 | D4AW73 | D4AZJ0 | Uncharacterized protein. | RAD52 DNA repair protein RADC. | 0.868 |
ARB_00438 | ARB_01727 | D4AW73 | D4AZV7 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.876 |
ARB_00438 | ARB_02542 | D4AW73 | D4B259 | Uncharacterized protein. | Exonuclease, putative. | 0.941 |
ARB_00438 | ARB_02596 | D4AW73 | D4B2I8 | Uncharacterized protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.983 |
ARB_00438 | ARB_03186 | D4AW73 | D4B3Z7 | Uncharacterized protein. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.839 |
ARB_00438 | ARB_03387 | D4AW73 | D4B4J7 | Uncharacterized protein. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.866 |
ARB_00438 | ARB_04243 | D4AW73 | D4AIZ5 | Uncharacterized protein. | SAE2 domain-containing protein. | 0.823 |
ARB_00438 | ARB_04991 | D4AW73 | D4AKZ5 | Uncharacterized protein. | RecQ family helicase MusN. | 0.947 |
ARB_00438 | ARB_06028 | D4AW73 | D4AP61 | Uncharacterized protein. | Inositol kinase kinase (UvsB), putative. | 0.837 |
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