STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP9Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. (716 aa)    
Predicted Functional Partners:
ARB_02807
Sas10 domain-containing protein.
   
   0.957
ARB_06061
Uncharacterized protein.
   
 
 0.895
ARB_05411
Uncharacterized protein.
 
      0.861
ARB_05350
Vesicle-mediated transport protein Bfr2/Che-1, putative.
   
 
 0.859
ARB_06140
Uncharacterized protein.
   
 
 0.848
ARB_02055
Nop domain-containing protein.
   
   0.839
ARB_00560
Uncharacterized protein.
   
 
 0.819
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.808
ARB_05426
Brix domain-containing protein.
   
    0.806
ARB_02858
CBF domain-containing protein.
   
 
 0.805
Your Current Organism:
Trichophyton benhamiae
NCBI taxonomy Id: 663331
Other names: Arthroderma benhamiae CBS 112371, T. benhamiae CBS 112371, Trichophyton benhamiae CBS 112371
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