STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746085_00632Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_000746085_00631
Unannotated protein.
 0.999
GCA_000746085_03069
Unannotated protein.
 0.999
GCA_000746085_00167
Unannotated protein.
 
 0.997
GCA_000746085_00629
Unannotated protein.
 
 0.989
GCA_000746085_00630
Unannotated protein.
 
 
 0.966
GCA_000746085_02726
Unannotated protein.
  
 
 0.929
GCA_000746085_00021
Unannotated protein.
 
 
 0.900
GCA_000746085_01998
Unannotated protein.
 
 
 0.874
GCA_000746085_00169
Unannotated protein.
 
 
 0.867
GCA_000746085_02168
Unannotated protein.
  
 
 0.848
Your Current Organism:
Methylocapsa aurea
NCBI taxonomy Id: 663610
Other names: DSM 22158, M. aurea, Methylocapsa aurea Dunfield et al. 2010, Methylocapsa sp. KYG, VKM B-2544, strain KYG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.