STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746085_01781Unannotated protein. (226 aa)    
Predicted Functional Partners:
GCA_000746085_00788
Unannotated protein.
  
     0.664
GCA_000746085_03063
Unannotated protein.
  
  
  0.664
GCA_000746085_00501
Unannotated protein.
 
  
 0.617
GCA_000746085_02424
Unannotated protein.
     
 0.547
GCA_000746085_01477
Unannotated protein.
   
 
  0.514
GCA_000746085_01622
Unannotated protein.
  
     0.509
GCA_000746085_00670
Unannotated protein.
     
 0.502
GCA_000746085_00309
Unannotated protein.
   
 
  0.497
GCA_000746085_01780
Unannotated protein.
       0.489
GCA_000746085_01782
Unannotated protein.
       0.470
Your Current Organism:
Methylocapsa aurea
NCBI taxonomy Id: 663610
Other names: DSM 22158, M. aurea, Methylocapsa aurea Dunfield et al. 2010, Methylocapsa sp. KYG, VKM B-2544, strain KYG
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.