STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746085_02494Unannotated protein. (367 aa)    
Predicted Functional Partners:
GCA_000746085_01904
Unannotated protein.
  
     0.683
GCA_000746085_01270
Unannotated protein.
  
     0.614
GCA_000746085_01908
Unannotated protein.
  
     0.592
GCA_000746085_01273
Unannotated protein.
  
     0.578
GCA_000746085_03163
Unannotated protein.
  
     0.487
GCA_000746085_02495
Unannotated protein.
       0.477
GCA_000746085_02493
Unannotated protein.
       0.473
GCA_000746085_01272
Unannotated protein.
  
  
  0.469
GCA_000746085_00679
Unannotated protein.
  
     0.449
GCA_000746085_01274
Unannotated protein.
  
     0.441
Your Current Organism:
Methylocapsa aurea
NCBI taxonomy Id: 663610
Other names: DSM 22158, M. aurea, Methylocapsa aurea Dunfield et al. 2010, Methylocapsa sp. KYG, VKM B-2544, strain KYG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.