STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746085_03381Unannotated protein. (171 aa)    
Predicted Functional Partners:
GCA_000746085_03386
Unannotated protein.
 
 
 0.960
GCA_000746085_03382
Unannotated protein.
 
     0.950
GCA_000746085_03383
Unannotated protein.
 
     0.949
GCA_000746085_03384
Unannotated protein.
 
     0.949
GCA_000746085_02369
Unannotated protein.
    
 
 0.931
GCA_000746085_02620
Unannotated protein.
    
   0.924
GCA_000746085_03387
Unannotated protein.
 
  
 0.916
GCA_000746085_03385
Unannotated protein.
 
     0.909
GCA_000746085_03199
Unannotated protein.
 
 
 0.715
GCA_000746085_03388
Unannotated protein.
 
  
 0.705
Your Current Organism:
Methylocapsa aurea
NCBI taxonomy Id: 663610
Other names: DSM 22158, M. aurea, Methylocapsa aurea Dunfield et al. 2010, Methylocapsa sp. KYG, VKM B-2544, strain KYG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.