STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717745_01740Unannotated protein. (718 aa)    
Predicted Functional Partners:
GCA_000717745_04729
Unannotated protein.
 
    0.769
GCA_000717745_04740
Unannotated protein.
 
  
 0.755
GCA_000717745_01741
Unannotated protein.
  
    0.676
GCA_000717745_06600
Unannotated protein.
  
    0.622
GCA_000717745_03668
Unannotated protein.
  
    0.593
GCA_000717745_01769
Unannotated protein.
  
    0.589
GCA_000717745_01553
Unannotated protein.
   
    0.525
GCA_000717745_03948
Unannotated protein.
  
    0.525
GCA_000717745_05840
Unannotated protein.
   
    0.513
GCA_000717745_00605
Unannotated protein.
   
    0.505
Your Current Organism:
Streptomyces violens
NCBI taxonomy Id: 66377
Other names: ATCC 15898, BCRC 12540, CBS 451.65, CBS 787.72, CCRC 12540, CCRC:12540, Chainia violens, DSM 40597, IFO 12557, IFO 13486, ISP 5597, JCM 3072, JCM 4852, NBRC 12557, NBRC 13486, NCAIM B.01477, NRRL B-3484, NRRL-ISP 5597, PCM 2247, RIA 565, S. violens, VKM Ac-586, VKM Ac-653
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.