STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717745_02710Unannotated protein. (420 aa)    
Predicted Functional Partners:
GCA_000717745_02375
Unannotated protein.
  
 0.977
GCA_000717745_04892
Unannotated protein.
    
 0.803
GCA_000717745_06410
Unannotated protein.
    
 0.803
GCA_000717745_00903
Unannotated protein.
  
     0.773
GCA_000717745_03349
Unannotated protein.
  
     0.771
GCA_000717745_00563
Unannotated protein.
   
 0.737
GCA_000717745_00564
Unannotated protein.
   
 0.685
GCA_000717745_00565
Unannotated protein.
   
 0.685
GCA_000717745_02098
Unannotated protein.
       0.559
GCA_000717745_01498
Unannotated protein.
  
  
 
0.538
Your Current Organism:
Streptomyces violens
NCBI taxonomy Id: 66377
Other names: ATCC 15898, BCRC 12540, CBS 451.65, CBS 787.72, CCRC 12540, CCRC:12540, Chainia violens, DSM 40597, IFO 12557, IFO 13486, ISP 5597, JCM 3072, JCM 4852, NBRC 12557, NBRC 13486, NCAIM B.01477, NRRL B-3484, NRRL-ISP 5597, PCM 2247, RIA 565, S. violens, VKM Ac-586, VKM Ac-653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.