Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Fen1 | RR46_00605 | A0A194QFL0 | A0A0N1IC29 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.404 |
| Fen1 | RR46_01031 | A0A194QFL0 | A0A0N1IAM1 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Mediator of RNA polymerase II transcription subunit 26. | 0.566 |
| Fen1 | RR46_09830 | A0A194QFL0 | A0A194QAY5 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA excision repair protein ERCC-6. | 0.711 |
| Fen1 | RR46_13119 | A0A194QFL0 | A0A194PMJ0 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Transcription elongation factor S-II. | 0.592 |
| RR46_00605 | Fen1 | A0A0N1IC29 | A0A194QFL0 | Uncharacterized protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.404 |
| RR46_00605 | RR46_01031 | A0A0N1IC29 | A0A0N1IAM1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 26. | 0.557 |
| RR46_00605 | RR46_03388 | A0A0N1IC29 | A0A194Q9D4 | Uncharacterized protein. | SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. | 0.485 |
| RR46_00605 | RR46_04544 | A0A0N1IC29 | A0A194PM11 | Uncharacterized protein. | SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family. | 0.803 |
| RR46_00605 | RR46_07806 | A0A0N1IC29 | A0A194QEZ3 | Uncharacterized protein. | SUMO-activating enzyme subunit 1. | 0.549 |
| RR46_00605 | RR46_09830 | A0A0N1IC29 | A0A194QAY5 | Uncharacterized protein. | DNA excision repair protein ERCC-6. | 0.626 |
| RR46_00605 | RR46_10654 | A0A0N1IC29 | A0A194PKY6 | Uncharacterized protein. | Flap endonuclease GEN. | 0.404 |
| RR46_00605 | RR46_13119 | A0A0N1IC29 | A0A194PMJ0 | Uncharacterized protein. | Transcription elongation factor S-II. | 0.557 |
| RR46_01031 | Fen1 | A0A0N1IAM1 | A0A194QFL0 | Mediator of RNA polymerase II transcription subunit 26. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.566 |
| RR46_01031 | RR46_00605 | A0A0N1IAM1 | A0A0N1IC29 | Mediator of RNA polymerase II transcription subunit 26. | Uncharacterized protein. | 0.557 |
| RR46_01031 | RR46_09830 | A0A0N1IAM1 | A0A194QAY5 | Mediator of RNA polymerase II transcription subunit 26. | DNA excision repair protein ERCC-6. | 0.842 |
| RR46_01031 | RR46_10654 | A0A0N1IAM1 | A0A194PKY6 | Mediator of RNA polymerase II transcription subunit 26. | Flap endonuclease GEN. | 0.566 |
| RR46_03388 | RR46_00605 | A0A194Q9D4 | A0A0N1IC29 | SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. | Uncharacterized protein. | 0.485 |
| RR46_03388 | RR46_04544 | A0A194Q9D4 | A0A194PM11 | SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. | SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family. | 0.998 |
| RR46_03388 | RR46_07806 | A0A194Q9D4 | A0A194QEZ3 | SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. | SUMO-activating enzyme subunit 1. | 0.998 |
| RR46_04544 | RR46_00605 | A0A194PM11 | A0A0N1IC29 | SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.803 |
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