STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR46_11969Tumor protein D54. (331 aa)    
Predicted Functional Partners:
RR46_07820
SNARE-associated protein Snapin.
   
 
  0.700
RR46_12452
Sorting nexin-6.
   
 
  0.693
RR46_02052
GA-binding protein subunit beta-2.
    
  0.658
RR46_13707
Sortilin-related receptor.
     
 0.624
RR46_14700
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
     
 0.599
RR46_14697
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
     
 0.599
RR46_03648
Ras-related protein Rab-5B.
     
 0.595
RR46_07421
Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A.
    
  0.586
RR46_03655
Type II inositol-1,4,5-trisphosphate 5-phosphatase.
    
  0.586
RR46_09167
DUF1298 domain-containing protein.
    
  0.586
Your Current Organism:
Papilio xuthus
NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus
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