STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR46_04958Ell-associated factor Eaf. (355 aa)    
Predicted Functional Partners:
RR46_02581
Uncharacterized protein.
    
 0.979
RR46_08853
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.960
RR46_05929
DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family.
    
 0.954
RR46_01483
AF4/FMR2 family member 4.
    
 0.940
RR46_13119
Transcription elongation factor S-II.
    
 0.911
RR46_01031
Mediator of RNA polymerase II transcription subunit 26.
    
 0.898
RR46_13463
DNA-directed RNA polymerase II subunit RPB3.
    
 0.898
RR46_02479
Transcription elongation factor SPT5.
    
 0.889
RR46_09578
Protein AF-9.
   
 0.877
RR46_09590
Protein ENL.
   
 0.877
Your Current Organism:
Papilio xuthus
NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.