STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR46_09641RBR-type E3 ubiquitin transferase. (502 aa)    
Predicted Functional Partners:
RR46_01076
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.988
RR46_14746
RING-box protein 1A.
    
 0.981
RR46_05978
Ubiquitin-like protein Nedd8.
    
 0.978
RR46_13910
Ubiquitin-60S ribosomal protein L40.
    
  0.969
RR46_12599
Cullin-1.
   
 0.948
RR46_12600
Cullin-1; Belongs to the cullin family.
   
 0.948
RR46_14742
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.896
RR46_12966
Cullin-3; Belongs to the cullin family.
   
 0.895
RR46_12967
Cullin-3-B; Belongs to the cullin family.
   
 0.895
RR46_09439
Cyclin-dependent kinase inhibitor 1B.
    
   0.877
Your Current Organism:
Papilio xuthus
NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.