STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR46_08674Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (288 aa)    
Predicted Functional Partners:
RR46_05895
Nuclear pore protein.
   
 0.996
RR46_14943
Nuclear pore complex protein Nup155.
   
 0.994
RR46_05777
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
   
 0.991
RR46_06984
Nuclear pore complex protein Nup98-Nup96.
   
 0.991
RR46_11576
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.990
RR46_07247
Nucleoporin Ndc1.
    
 0.990
RR46_14206
Nuclear pore complex protein Nup214.
    
 0.988
RR46_11674
Nuclear pore complex protein Nup88.
    
 0.988
RR46_15268
Protein ELYS.
    
 0.987
RR46_08745
Nuclear pore complex protein Nup133.
   
 0.986
Your Current Organism:
Papilio xuthus
NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.