Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RR46_00487 | RR46_03519 | A0A0N1I4F6 | A0A194QD35 | Voltage-dependent calcium channel type D subunit alpha-1. | Protein unc-79-like. | 0.997 |
RR46_01036 | RR46_03519 | A0A0N1I3U9 | A0A194QD35 | Voltage-dependent calcium channel type D subunit alpha-1. | Protein unc-79-like. | 0.997 |
RR46_02595 | RR46_03519 | A0A194Q2B4 | A0A194QD35 | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | Protein unc-79-like. | 0.997 |
RR46_03519 | RR46_00487 | A0A194QD35 | A0A0N1I4F6 | Protein unc-79-like. | Voltage-dependent calcium channel type D subunit alpha-1. | 0.997 |
RR46_03519 | RR46_01036 | A0A194QD35 | A0A0N1I3U9 | Protein unc-79-like. | Voltage-dependent calcium channel type D subunit alpha-1. | 0.997 |
RR46_03519 | RR46_02595 | A0A194QD35 | A0A194Q2B4 | Protein unc-79-like. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.997 |
RR46_03519 | RR46_08932 | A0A194QD35 | A0A194PR88 | Protein unc-79-like. | Voltage-dependent calcium channel type A subunit alpha-1. | 0.997 |
RR46_03519 | RR46_10332 | A0A194QD35 | A0A194Q1Z0 | Protein unc-79-like. | Two pore calcium channel protein 1. | 0.997 |
RR46_03519 | RR46_12226 | A0A194QD35 | A0A194PPI5 | Protein unc-79-like. | Voltage-dependent calcium channel type D subunit alpha-1. | 0.997 |
RR46_03519 | RR46_12245 | A0A194QD35 | A0A194PP78 | Protein unc-79-like. | Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. | 0.997 |
RR46_03519 | RR46_12246 | A0A194QD35 | A0A194PPK2 | Protein unc-79-like. | Muscle calcium channel subunit alpha-1. | 0.997 |
RR46_03519 | RR46_12988 | A0A194QD35 | A0A194PLF1 | Protein unc-79-like. | Sodium leak channel non-selective protein. | 0.997 |
RR46_03519 | RR46_12989 | A0A194QD35 | A0A194PM60 | Protein unc-79-like. | Sodium leak channel non-selective protein. | 0.997 |
RR46_08932 | RR46_03519 | A0A194PR88 | A0A194QD35 | Voltage-dependent calcium channel type A subunit alpha-1. | Protein unc-79-like. | 0.997 |
RR46_08932 | RR46_12226 | A0A194PR88 | A0A194PPI5 | Voltage-dependent calcium channel type A subunit alpha-1. | Voltage-dependent calcium channel type D subunit alpha-1. | 0.404 |
RR46_08932 | RR46_12245 | A0A194PR88 | A0A194PP78 | Voltage-dependent calcium channel type A subunit alpha-1. | Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. | 0.401 |
RR46_10332 | RR46_03519 | A0A194Q1Z0 | A0A194QD35 | Two pore calcium channel protein 1. | Protein unc-79-like. | 0.997 |
RR46_12226 | RR46_03519 | A0A194PPI5 | A0A194QD35 | Voltage-dependent calcium channel type D subunit alpha-1. | Protein unc-79-like. | 0.997 |
RR46_12226 | RR46_08932 | A0A194PPI5 | A0A194PR88 | Voltage-dependent calcium channel type D subunit alpha-1. | Voltage-dependent calcium channel type A subunit alpha-1. | 0.404 |
RR46_12245 | RR46_03519 | A0A194PP78 | A0A194QD35 | Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. | Protein unc-79-like. | 0.997 |
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