STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR46_03586SWI/SNF complex subunit SMARCC2. (78 aa)    
Predicted Functional Partners:
RR46_10433
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A.
   
 0.982
RR46_04061
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
    
 0.982
RR46_08967
ATP-dependent helicase brm.
   
 0.981
RR46_09461
SWI/SNF-related matrix-associated actin-dependent regulator chromatin subfamily E member 1.
    
 0.981
RR46_12682
Actin-like protein 6A; Belongs to the actin family.
    
 0.977
RR46_01481
AT-rich interactive domain-containing protein 2.
   
 0.976
RR46_06725
Trithorax group protein osa.
   
 0.976
RR46_00120
Protein polybromo-1.
   
 0.948
RR46_05365
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.948
RR46_06318
Protein polybromo-1.
   
 0.948
Your Current Organism:
Papilio xuthus
NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.