STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR46_14277RNA exonuclease 4. (160 aa)    
Predicted Functional Partners:
RR46_03204
WD repeat-containing protein 18.
   
  0.905
PAN3
PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]
    
 0.878
RR46_10253
RNA helicase.
  
 0.868
RR46_11186
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.862
RR46_12847
U3 small nucleolar ribonucleoprotein IMP4.
   
   0.816
RR46_07931
60S ribosomal protein L7.
   
 0.812
RR46_08900
Deoxynucleotidyltransferase terminal-interacting protein 2.
   
    0.811
RR46_03650
rRNA-processing protein UTP23-like.
   
   0.809
RR46_04833
Zinc finger CCHC domain-containing protein 9.
   
   0.794
RR46_05684
Putative ribosome biogenesis protein RLP24.
   
    0.789
Your Current Organism:
Papilio xuthus
NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.