STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO99451.1Peptidase M4; Derived by automated computational analysis using gene prediction method: Protein Homology. (755 aa)    
Predicted Functional Partners:
KMO97319.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.616
KMO98759.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M7 family.
  
     0.563
KMO98624.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.550
KMO97597.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
KMO98551.1
Streptogrisin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.441
KMO98936.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.426
KMO99269.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.415
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.