STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO98881.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)    
Predicted Functional Partners:
KMO98461.1
PTS alpha-glucoside transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.865
KMO98882.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
     
 0.802
KMO98883.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.801
KMO96008.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.761
KMO94473.1
CBS domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.760
KMO96235.1
N-acyl-D-glucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.709
KMO97920.1
Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.661
KMO99774.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.649
KMO94420.1
Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.637
KMO95245.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.635
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.