STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aguAAgmatine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)    
Predicted Functional Partners:
KMO98530.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
KMO98658.1
Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.761
KMO93475.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.748
KMO98258.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
KMO94880.1
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
    
 0.713
ureC-2
Urease subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.711
KMO98260.1
Urease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.609
KMO93671.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.574
KMO95208.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.548
KMO96617.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.538
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.