STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO98278.1Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (978 aa)    
Predicted Functional Partners:
KMO96592.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KMO99268.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.994
KMO95436.1
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.994
KMO99155.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.986
KMO99170.1
PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.962
KMO98445.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.962
KMO98027.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.962
KMO94746.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.962
KMO98898.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.948
KMO98843.1
Bi-functional transferase/deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.948
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.