STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO98287.1Penicillin amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)    
Predicted Functional Partners:
KMO98288.1
Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.988
KMO94029.1
Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.898
KMO99683.1
Penicillin amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.895
KMO98286.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.860
KMO94675.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.853
KMO99232.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.742
KMO99233.1
IucA/IucC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.605
KMO99230.1
Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.595
KMO96388.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
KMO94635.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.