STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO97441.1C-5 sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)    
Predicted Functional Partners:
KMO99207.1
Squalene-hopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.918
KMO94038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.918
KMO99176.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.878
KMO99209.1
Squalene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.878
KMO94490.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.878
KMO97479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.870
KMO96015.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.848
KMO98278.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.713
KMO95232.1
P450 reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.698
KMO96193.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.695
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.