STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO96529.1NocE; Derived by automated computational analysis using gene prediction method: Protein Homology. (1375 aa)    
Predicted Functional Partners:
KMO95643.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.708
KMO96846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.641
KMO99815.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.560
KMO95319.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.557
KMO98899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.520
KMO96422.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.520
KMO94323.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.520
KMO94026.1
Kanamycin biosynthetic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.520
KMO99202.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.498
KMO96583.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.498
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.