STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO95343.1Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)    
Predicted Functional Partners:
KMO94465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.735
KMO95342.1
RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.
  
 
 0.704
KMO99020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.679
KMO95341.1
Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.670
KMO98278.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.647
KMO95344.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.643
KMO99021.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.630
KMO97853.1
Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
   
 
 0.605
KMO94634.1
Antitermination regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.579
KMO95340.1
Antitermination regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.574
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.