STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO95391.1Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)    
Predicted Functional Partners:
KMO99545.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
KMO99613.1
HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
KMO98219.1
HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
KMO96108.1
HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
KMO93668.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
KMO95390.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
KMO98479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.593
KMO98480.1
SPFH/Band 7/PHB domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.593
KMO97351.1
Molybdenum metabolism regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.535
KMO95389.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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