STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO95399.1Nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)    
Predicted Functional Partners:
KMO95400.1
Methylene-tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.804
KMO97007.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
KMO98824.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
KMO95473.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
rpmF-3
50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.
       0.558
KMO99379.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.550
KMO97881.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.550
KMO96513.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.550
KMO96367.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.550
KMO95569.1
ToxA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.550
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.