STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUP97289.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)    
Predicted Functional Partners:
KUP96595.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.887
KUP97318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
KUP97386.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.697
KUP96098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
KUP97465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
  0.595
KUP96844.1
Kynureninase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.589
KUP97865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
  0.583
KUP97531.1
Cytochrome P450-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
  0.578
KUP97288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.575
KUP97287.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.568
Your Current Organism:
Thermobifida cellulosilytica
NCBI taxonomy Id: 665004
Other names: T. cellulosilytica TB100, Thermobifida cellulosilytica DSM 44535, Thermobifida cellulosilytica TB100, Thermobifida cellulosilytica str. TB100, Thermobifida cellulosilytica strain TB100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.