STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08709.1Peptidase S8. (539 aa)    
Predicted Functional Partners:
AKJ08870.1
Phospholipase C.
  
     0.661
AKJ09527.1
Hypothetical protein.
  
     0.644
AKJ09528.1
Hypothetical protein.
  
     0.600
AKJ08708.1
LuxR family transcriptional regulator.
 
     0.553
AKJ10689.1
Hypothetical protein.
  
     0.535
AKJ15213.1
MarR family transcriptional regulator.
  
     0.447
AKJ08735.1
Phosphodiesterase.
  
     0.446
AKJ08901.1
Chitinase.
  
     0.418
AKJ15214.1
MFS transporter.
  
     0.418
AKJ09690.1
Chloride channel protein.
  
     0.406
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.