STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08715.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
AKJ08716.1
Transcriptional regulator.
  
  
 0.883
lysS-2
lysyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.663
AKJ08717.1
Hypothetical protein.
       0.611
AKJ08718.1
XRE family transcriptional regulator.
 
     0.553
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
  0.529
AKJ08714.1
PAS/PAC sensor protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.511
AKJ15102.1
Amino acid transporter.
  
    0.478
AKJ15229.1
Lysine transporter LysE.
  
    0.478
AKJ08765.1
Acetyltransferase.
   
    0.475
arcA
Arginine deiminase; Catalyzes the degradation of arginine to citruline and ammonia.
 
     0.414
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.