STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08822.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
AKJ08821.1
3-oxoacyl-ACP synthase.
       0.790
AKJ10399.1
Hypothetical protein.
  
 
 0.767
AKJ11400.1
Hypothetical protein.
  
 
 0.767
AKJ10386.1
Membrane protein.
   
    0.465
AKJ11771.1
Secretion protein snm4.
   
    0.465
AKJ10008.1
Endonuclease.
   
    0.459
AKJ08823.1
Hypothetical protein.
       0.453
AKJ09702.1
Membrane protein.
   
 
 0.438
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.438
AKJ11471.1
Hypothetical protein.
   
 
 0.438
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.