STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08870.1Phospholipase C. (613 aa)    
Predicted Functional Partners:
AKJ15011.1
Hypothetical protein.
  
  
  0.946
AKJ09450.1
Phospholipase C.
  
  
 
0.861
AKJ11620.1
Cardiolipin synthase.
  
  
 0.834
AKJ15497.1
Acid phosphatase.
 
  
  0.831
AKJ13576.1
Acid phosphatase.
 
  
  0.830
AKJ08868.1
Iron transporter.
 
     0.785
AKJ14715.1
Phosphoesterase.
  
  
 
0.759
AKJ11913.1
Peptidase S8.
  
     0.699
AKJ12265.1
Peptidase S8.
  
     0.690
AKJ13772.1
Peptidase S8.
  
     0.685
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.