STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08988.1Endoglycosylceramidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (622 aa)    
Predicted Functional Partners:
AKJ11120.1
Membrane protein.
   
 0.942
AKJ10765.1
Chitinase.
  
 
 0.741
AKJ08588.1
Hypothetical protein.
  
 
  0.729
AKJ09961.1
Serine protease.
  
 
  0.716
AKJ14280.1
Hypothetical protein.
 
   
 0.624
AKJ08989.1
GTP-binding protein.
       0.622
AKJ09932.1
Hypothetical protein.
  
     0.611
AKJ09579.1
Oligosaccharide deacetylase.
  
 
 0.590
AKJ13585.1
Sulfonate ABC transporter ATP-binding protein; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.585
sti
Protease inhibitor protein; Strong inhibitor of bacterial serine proteases such as subtilisin.
  
 
  0.576
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.