Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09078.1 | AKJ09080.1 | ABB07_03260 | ABB07_03270 | Hypothetical protein. | Histidinol phosphatase. | 0.679 |
AKJ09078.1 | AKJ09081.1 | ABB07_03260 | ABB07_03275 | Hypothetical protein. | HAD family hydrolase. | 0.653 |
AKJ09080.1 | AKJ09078.1 | ABB07_03270 | ABB07_03260 | Histidinol phosphatase. | Hypothetical protein. | 0.679 |
AKJ09080.1 | AKJ09081.1 | ABB07_03270 | ABB07_03275 | Histidinol phosphatase. | HAD family hydrolase. | 0.780 |
AKJ09080.1 | AKJ13405.1 | ABB07_03270 | ABB07_26260 | Histidinol phosphatase. | Aminotransferase. | 0.736 |
AKJ09080.1 | AKJ14848.1 | ABB07_03270 | ABB07_33750 | Histidinol phosphatase. | Hypothetical protein. | 0.679 |
AKJ09080.1 | hisB | ABB07_03270 | ABB07_28095 | Histidinol phosphatase. | Imidazoleglycerol-phosphate dehydratase. | 0.688 |
AKJ09080.1 | hisC | ABB07_03270 | ABB07_28090 | Histidinol phosphatase. | Aspartate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.879 |
AKJ09080.1 | hisD | ABB07_03270 | ABB07_28085 | Histidinol phosphatase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.917 |
AKJ09080.1 | hisI | ABB07_03270 | ABB07_28140 | Histidinol phosphatase. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.743 |
AKJ09080.1 | pat | ABB07_03270 | ABB07_19340 | Histidinol phosphatase. | Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.879 |
AKJ09080.1 | ybeY | ABB07_03270 | ABB07_25450 | Histidinol phosphatase. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.786 |
AKJ09081.1 | AKJ09078.1 | ABB07_03275 | ABB07_03260 | HAD family hydrolase. | Hypothetical protein. | 0.653 |
AKJ09081.1 | AKJ09080.1 | ABB07_03275 | ABB07_03270 | HAD family hydrolase. | Histidinol phosphatase. | 0.780 |
AKJ13405.1 | AKJ09080.1 | ABB07_26260 | ABB07_03270 | Aminotransferase. | Histidinol phosphatase. | 0.736 |
AKJ13405.1 | AKJ14848.1 | ABB07_26260 | ABB07_33750 | Aminotransferase. | Hypothetical protein. | 0.723 |
AKJ13405.1 | hisB | ABB07_26260 | ABB07_28095 | Aminotransferase. | Imidazoleglycerol-phosphate dehydratase. | 0.969 |
AKJ13405.1 | hisC | ABB07_26260 | ABB07_28090 | Aminotransferase. | Aspartate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.749 |
AKJ13405.1 | hisD | ABB07_26260 | ABB07_28085 | Aminotransferase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.947 |
AKJ13405.1 | hisI | ABB07_26260 | ABB07_28140 | Aminotransferase. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.882 |
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