STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ09163.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
AKJ09161.1
Membrane protein.
 
     0.871
AKJ09162.1
ArsR family transcriptional regulator.
 
    0.827
AKJ09442.1
4-carboxymuconolactone decarboxylase.
    
 0.612
AKJ09735.1
3-oxoadipate enol-lactonase.
    
 0.612
AKJ13788.1
Glutamate synthase.
  
    0.598
AKJ09164.1
Growth inhibitor PemK.
       0.555
AKJ13569.1
Transcriptional regulator.
  
    0.536
AKJ14245.1
Hypothetical protein.
  
  0.510
AKJ14579.1
Transcriptional regulator.
  
  0.510
AKJ14668.1
XRE family transcriptional regulator.
  
  0.510
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.