STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ09215.1LacI family transcriptional regulator. (362 aa)    
Predicted Functional Partners:
AKJ13788.1
Glutamate synthase.
    
 
 0.883
AKJ09214.1
ABC transporter substrate-binding protein.
 
  
  0.851
AKJ09213.1
ABC transporter permease.
 
  
  0.837
AKJ09212.1
ABC transporter permease.
 
  
  0.831
AKJ09211.1
Glycosyl hydrolase.
 
     0.790
AKJ10273.1
Phosphocarrier protein HPr.
   
 
 0.750
AKJ09210.1
endo-beta-N-acetylglucosaminidase.
  
    0.739
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.680
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.651
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
   0.636
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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