STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ09351.1Translation initiation factor IF-2. (270 aa)    
Predicted Functional Partners:
AKJ11709.1
XRE family transcriptional regulator.
 
     0.788
AKJ08913.1
XRE family transcriptional regulator.
  
     0.772
AKJ09612.1
XRE family transcriptional regulator.
  
     0.770
AKJ13843.1
XRE family transcriptional regulator.
  
     0.770
AKJ11711.1
Regulator.
  
     0.767
AKJ12913.1
Hypothetical protein.
  
     0.763
AKJ10468.1
DNA-binding protein.
  
     0.761
AKJ12544.1
XRE family transcriptional regulator.
  
     0.761
AKJ11803.1
DNA-binding protein.
  
     0.760
AKJ14631.1
XRE family transcriptional regulator.
  
     0.760
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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