Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09305.1 | AKJ09307.1 | ABB07_04505 | ABB07_04515 | Oxidase. | Proline racemase; Belongs to the proline racemase family. | 0.959 |
AKJ09305.1 | AKJ09409.1 | ABB07_04505 | ABB07_05055 | Oxidase. | Amino acid oxidase. | 0.811 |
AKJ09305.1 | AKJ13788.1 | ABB07_04505 | ABB07_28235 | Oxidase. | Glutamate synthase. | 0.905 |
AKJ09305.1 | AKJ15344.1 | ABB07_04505 | ABB07_36380 | Oxidase. | Sarcosine dehydrogenase; Belongs to the GcvT family. | 0.807 |
AKJ09305.1 | gcvP | ABB07_04505 | ABB07_31960 | Oxidase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.851 |
AKJ09305.1 | gcvT | ABB07_04505 | ABB07_11755 | Oxidase. | Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. | 0.601 |
AKJ09307.1 | AKJ09305.1 | ABB07_04515 | ABB07_04505 | Proline racemase; Belongs to the proline racemase family. | Oxidase. | 0.959 |
AKJ09307.1 | AKJ09409.1 | ABB07_04515 | ABB07_05055 | Proline racemase; Belongs to the proline racemase family. | Amino acid oxidase. | 0.812 |
AKJ09409.1 | AKJ09305.1 | ABB07_05055 | ABB07_04505 | Amino acid oxidase. | Oxidase. | 0.811 |
AKJ09409.1 | AKJ09307.1 | ABB07_05055 | ABB07_04515 | Amino acid oxidase. | Proline racemase; Belongs to the proline racemase family. | 0.812 |
AKJ09409.1 | AKJ09828.1 | ABB07_05055 | ABB07_07280 | Amino acid oxidase. | Malate synthase; Belongs to the malate synthase family. | 0.834 |
AKJ09409.1 | AKJ09867.1 | ABB07_05055 | ABB07_07480 | Amino acid oxidase. | Hydroxypyruvate isomerase; Belongs to the hyi family. | 0.842 |
AKJ09409.1 | AKJ13511.1 | ABB07_05055 | ABB07_26815 | Amino acid oxidase. | Methyltransferase type 11. | 0.820 |
AKJ09409.1 | AKJ13788.1 | ABB07_05055 | ABB07_28235 | Amino acid oxidase. | Glutamate synthase. | 0.858 |
AKJ09409.1 | AKJ15344.1 | ABB07_05055 | ABB07_36380 | Amino acid oxidase. | Sarcosine dehydrogenase; Belongs to the GcvT family. | 0.907 |
AKJ09409.1 | AKJ15349.1 | ABB07_05055 | ABB07_36405 | Amino acid oxidase. | Sarcosine oxidase subunit gamma. | 0.920 |
AKJ09409.1 | gcvP | ABB07_05055 | ABB07_31960 | Amino acid oxidase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.834 |
AKJ09409.1 | gcvT | ABB07_05055 | ABB07_11755 | Amino acid oxidase. | Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. | 0.925 |
AKJ09828.1 | AKJ09409.1 | ABB07_07280 | ABB07_05055 | Malate synthase; Belongs to the malate synthase family. | Amino acid oxidase. | 0.834 |
AKJ09828.1 | AKJ15344.1 | ABB07_07280 | ABB07_36380 | Malate synthase; Belongs to the malate synthase family. | Sarcosine dehydrogenase; Belongs to the GcvT family. | 0.534 |
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