STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ09439.1Protocatechuate 3,4-dioxygenase. (257 aa)    
Predicted Functional Partners:
AKJ09440.1
Protocatechuate 3,4-dioxygenase.
 
 
0.999
AKJ09441.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.998
AKJ09442.1
4-carboxymuconolactone decarboxylase.
 
 
 0.980
AKJ12688.1
Catalyzes the formation of protocatechuate from 4-hydroxybenzoate.
 
 
 0.962
AKJ14580.1
4-hydroxybenzoate 3-monooxygenase.
 
 
 0.962
AKJ09735.1
3-oxoadipate enol-lactonase.
 
 
 0.914
AKJ09436.1
succinyl-CoA:3-ketoacid-CoA transferase.
  
 
 0.881
AKJ09437.1
succinyl-CoA:3-ketoacid-CoA transferase.
  
 
 0.873
AKJ09482.1
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.845
AKJ09435.1
DNA-binding protein.
     
 0.842
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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